USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: HNRDL_HUMAN USC-OGP 2-DE database:  HNRDL_HUMAN HNRDL_HUMAN General information about the entry View entry in simple text format Entry name HNRDL_HUMAN Primary accession number O14979 Secondary accession number(s) Q96IM0 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like; Short=hnRNP D-like; Short=hnRNP DL; AltName: Full=AU-rich element RNA-binding factor; AltName: Full=JKT41-binding protein; AltName: Full=Protein laAUF1;. Gene name Name=HNRNPDL Synonyms=HNRPDL, JKTBP Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1224: pI=6.85; Mw=35254 Cross-references UniProtKB/Swiss-Prot O14979; HNRDL_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name HNRDL_HUMAN Primary accession number O14979 Secondary accession number(s) Q6SPF2 Q7KZ74 Q7KZ75 Q96IM0 Q96S43 Sequence was last modified on  August 1, 1999 (version 3) Annotations were last modified on  March 15, 2017 (version 157) Name and origin of the protein Description RecName: Full=Heterogeneous nuclear ribonucleoprotein D-like; Short=hnRNP D-like; Short=hnRNP DL; AltName: Full=AU-rich element RNA-binding factor; AltName: Full=JKT41-binding protein; AltName: Full=Protein laAUF1; Gene name Name=HNRNPDL Synonyms=HNRPDL, JKTBP Encoded on Name=HNRNPDL; Synonyms=HNRPDL, JKTBP Keywords Acetylation; Activator; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; Disease mutation; DNA-binding; Limb-girdle muscular dystrophy; Methylation; Nucleus; Phosphoprotein; Reference proteome; Repeat; Repressor; RNA-binding; Transcription; Transcription regulation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AB017019; BAA75241.1; -; mRNA EMBL D89092; BAA24361.1; -; mRNA EMBL AB066484; BAB62188.1; -; mRNA EMBL CR407623; CAG28551.1; -; mRNA EMBL AC124016; AAY40914.1; -; Genomic_DNA EMBL AB017018; BAA75239.1; -; Genomic_DNA EMBL AB017018; BAA75240.1; -; Genomic_DNA EMBL BC007392; AAH07392.2; -; mRNA EMBL BC011714; AAH11714.1; -; mRNA EMBL BC071944; AAH71944.1; -; mRNA EMBL AY453824; AAR17782.1; -; mRNA EMBL D89678; BAA22860.1; ALT_INIT; mRNA CCDS CCDS3593.1; -. [O14979-1]; . PIR JW0079; JW0079; . RefSeq NP_001193929.1; NM_001207000.1; . RefSeq NP_112740.1; NM_031372.3. [O14979-1]; . UniGene Hs.527105; -; . UniGene Hs.707013; -; . ProteinModelPortal O14979; -; . SMR O14979; -; . BioGrid 115308; 117; . IntAct O14979; 40; . MINT MINT-2998491; -; . STRING 9606.ENSP00000295470; -; . iPTMnet O14979; -; . PhosphoSitePlus O14979; -; . SwissPalm O14979; -; . BioMuta HNRNPDL; -; . EPD O14979; -; . MaxQB O14979; -; . PaxDb O14979; -; . PeptideAtlas O14979; -; . PRIDE O14979; -; . DNASU 9987; -; . Ensembl ENST00000295470; ENSP00000295470; ENSG00000152795. [O14979-1]; . Ensembl ENST00000349655; ENSP00000338552; ENSG00000152795. [O14979-2]; . Ensembl ENST00000502762; ENSP00000422040; ENSG00000152795. [O14979-1]; . Ensembl ENST00000507721; ENSP00000480156; ENSG00000152795. [O14979-2]; . Ensembl ENST00000602300; ENSP00000473677; ENSG00000152795. [O14979-2]; . Ensembl ENST00000621267; ENSP00000483254; ENSG00000152795. [O14979-1]; . Ensembl ENST00000630114; ENSP00000486452; ENSG00000152795. [O14979-2]; . Ensembl ENST00000630827; ENSP00000485954; ENSG00000152795. [O14979-2]; . GeneID 9987; -; . KEGG hsa:9987; -; . UCSC uc003hmr.4; human. [O14979-1]; . CTD 9987; -; . DisGeNET 9987; -; . GeneCards HNRNPDL; -; . HGNC HGNC:5037; HNRNPDL; . HPA HPA056820; -; . HPA HPA063147; -; . MalaCards HNRNPDL; -; . MIM 607137; gene; . MIM 609115; phenotype; . neXtProt NX_O14979; -; . OpenTargets ENSG00000152795; -; . Orphanet 55596; Autosomal dominant limb-girdle muscular dystrophy type 1G; . PharmGKB PA29362; -; . eggNOG ENOG410IQWX; Eukaryota; . eggNOG ENOG4111SPT; LUCA; . GeneTree ENSGT00760000118873; -; . HOGENOM HOG000234441; -; . HOVERGEN HBG002295; -; . InParanoid O14979; -; . KO K13044; -; . OMA GPGYTDY; -; . OrthoDB EOG091G1CPI; -; . PhylomeDB O14979; -; . TreeFam TF314808; -; . GeneWiki HNRPDL; -; . GenomeRNAi 9987; -; . PRO PR:O14979; -; . Proteomes UP000005640; Chromosome 4; . Bgee ENSG00000152795; -; . CleanEx HS_HNRPDL; -; . ExpressionAtlas O14979; baseline and differential; . Genevisible O14979; HS; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0005681; C:spliceosomal complex; NAS:UniProtKB; . GO GO:0003677; F:DNA binding; IEA:UniProtKB-KW; . GO GO:0003690; F:double-stranded DNA binding; IDA:UniProtKB; . GO GO:0000166; F:nucleotide binding; IEA:InterPro; . GO GO:0008143; F:poly(A) binding; IDA:UniProtKB; . GO GO:0034046; F:poly(G) binding; IDA:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB; . GO GO:0010468; P:regulation of gene expression; IDA:UniProtKB; . GO GO:0006355; P:regulation of transcription; DNA-templated; IEA:UniProtKB-KW GO GO:0006396; P:RNA processing; NAS:UniProtKB; . GO GO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW Gene3D 3.30.70.330; -; 2; . InterPro IPR012677; Nucleotide-bd_a/b_plait; . InterPro IPR000504; RRM_dom; . Pfam PF00076; RRM_1; 2; . SMART SM00360; RRM; 2; . SUPFAM SSF54928; SSF54928; 2; . PROSITE PS50102; RRM; 2; .

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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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